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Hands-on NGS Data Analysis Learn Variant Calling using Linux pipeline and perform variant calling easily on command line

https://www.udemy.com/course/practical-ngs-data-analysis-for-variant-calling-using-linux/

Unlock the Power of NGS Data Analysis for Variant Calling Using Linux

Are you ready to dive into the world of Next-Generation Sequencing (NGS) and harness its potential for groundbreaking genomic research? Our comprehensive course, "Hands-on NGS Data Analysis: Quality Control, Read Mapping, and Variant Calling," is designed to equip you with the essential skills to analyze NGS data from start to finish using Linux.

In this course, you will learn how to:

• Set Up Your Bioinformatics Environment: Install and configure essential tools such as FastQC, MultiQC, Samtools, BWA, Freebayes, bcftools, and tabix using Anaconda, a powerful package manager for scientific computing.

• Download and Prepare NGS Data: Acquire and prepare paired-end FASTQ reads and reference genomes, essential for high-quality genomic analysis.

• Perform Quality Control: Assess the quality of your sequencing data with FastQC and summarize results using MultiQC to ensure reliable downstream analysis.

• Map Reads to a Reference Genome: Align your NGS reads to a reference genome using BWA and process alignment files with Samtools for accurate variant calling.

• Identify and Mark Duplicates: Learn the importance of marking duplicate reads and use Samtools to enhance the accuracy of your variant calls.

• Call and Filter Variants: Use Freebayes for variant calling and bcftools for advanced filtering, enabling you to identify high-confidence genetic variants.

Who Is This Course For?

This course is perfect for:

• Biology and Bioinformatics Students looking to gain practical skills in NGS data analysis.

• Researchers and Scientists aiming to incorporate NGS data analysis into their research.

• Healthcare Professionals involved in genetic research or diagnostics.

• Data Analysts and Bioinformaticians expanding their skill set to include variant calling.

• IT Professionals in Life Sciences needing to understand NGS workflows and tools.

• Enthusiastic Beginners with a basic understanding of biology and a keen interest in bioinformatics.

Why Enroll?

• Hands-On Experience: Practical exercises with real-world data to solidify your learning.

• Comprehensive Coverage: From setting up your environment to variant calling and filtering, we cover every essential step.

• Career Advancement: Gain valuable skills for academic research, healthcare, biotechnology, and pharmaceutical industries.

• Beginner-Friendly: No prior experience in NGS data analysis required. Step-by-step instructions make learning accessible for everyone.

Enroll now and take the first step towards mastering NGS data analysis for variant calling. Equip yourself with the skills to make significant contributions to genomics research and open new career opportunities in the rapidly evolving field of bioinformatics.